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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833505.1_cds_XP_016505251.1_18608
CDS Infomation

[gene=LOC107823167] [db_xref=GeneID:107823167] [protein=protein SHOOT GRAVITROPISM 5-like isoform X2] [protein_id=XP_016505251.1] [location=join(42817..42919,43167..43318,43641..43903,44559..45261)] [gbkey=CDS]
Sequence

ATGCTAGCCAGCCACTCTTTCTTGTTTCCAGCTCCTTCTCAGTCTGAACCATTTTCTTCC
CCAGAAAATGGTTTCATTATCAAAAGAAAAAGAAGACCTGCTGATCCTGATGCACAAGTT
GTGTATCTCACAGCTGAGATGCTAATGGAATCCGATCGTTACGTTTGTGAAATCTGTAAC
CTTAGCTTTCAAAGAGAGCAGAATCTTCAGATGCACCGCCGACGCCATAAGGTTCCATGG
AAGTTGAAGAAGAAGGAAGAAGAGAAGAATGAGATGGAGCAAGTAAAGAAGAGAGTATAT
GTATGCCCAGAGCCAAGTTGTGTGCACCATAATCCAAGCCATGCACTAGGAGACCTTGTG
GGAATCAAAAAACATTTCAGAAGGAAACATAGCAATTACAAACAATGGGTTTGTCAGAAA
TGCTCTAAAGGTTATGCTGTTCAATCGGATTATAAAGCTCACATCAAAACTTGTGGTACC
AGAGGCCATTCTTGTGACTGTGGTCGAGTTTTCTCCAGAGTTGAAACGTTTATTGAACAT
CAAGATTCATGCAAAGCACAGAGTACTACTTCTACTACTACTAAAGAATGTGATGTGCAA
AAACCAAAGCCAGCTTTCTTGCAACCACAATGTTTTTCAAACTACTCAAATTCAAGAATG
CCTAAGAATACTACTGATCACCCTAATCTTGAACTTGAGCTTTTCACTTCTTCCAATTAT
AACCAAAACACATATTATTCTTCTTTCTTGCAAAATGAACACACCCCACAATTAGATTTG
TCATTTGGTAGTCAAAGTGATAATTATTACCAAGTCCAACACAATGAGAAAGCAGCAGCT
TTGATTATGGAAGACACAGCAATACAAGTATCAAAACTAAAAAGTGAAGCAAAAGAAATC
CTGAAAATAGCAATGGAAGAAAAGGCAATGGCTGCAGAGAAGAGACAAGAAGCAAAGTGT
TTGATTGAATTGGCCAACCTAGAAATGGCAAAAGCAAGGGAAATTAGACAACAATCATTA
TTAGCTGAATACAGTACTGCTCAGCTCCTAAAAGACTGTGCAGAAATGAAGATTGTTGGC
TCACAGTCACATGTGAAGATAATAACATGCACCTCTTGTAATAGTAAACAGTTCCAAACA
GTGTCAAAAGAGGCTGCAGTTTGTAGAGAGGTTTTCCCAGCTTTGACTAATTATTTGTCA
TCTTCCATTTACAGAAGGTAA

Peptide Sequence

PEP ID

XP_016505251.1
PEP Infomation

PREDICTED: protein SHOOT GRAVITROPISM 5-like isoform X2 [Nicotiana tabacum]
Sequence

MLASHSFLFPAPSQSEPFSSPENGFIIKRKRRPADPDAQVVYLTAEMLMESDRYVCEICN
LSFQREQNLQMHRRRHKVPWKLKKKEEEKNEMEQVKKRVYVCPEPSCVHHNPSHALGDLV
GIKKHFRRKHSNYKQWVCQKCSKGYAVQSDYKAHIKTCGTRGHSCDCGRVFSRVETFIEH
QDSCKAQSTTSTTTKECDVQKPKPAFLQPQCFSNYSNSRMPKNTTDHPNLELELFTSSNY
NQNTYYSSFLQNEHTPQLDLSFGSQSDNYYQVQHNEKAAALIMEDTAIQVSKLKSEAKEI
LKIAMEEKAMAAEKRQEAKCLIELANLEMAKAREIRQQSLLAEYSTAQLLKDCAEMKIVG
SQSHVKIITCTSCNSKQFQTVSKEAAVCREVFPALTNYLSSSIYRR

Transcript Sequence

Gene sequence data has not been registered.